包立随 副教授
中国海洋大学“青年英才工程”第三层次特聘教授
E-mail: baolisui@ouc.edu.cn
Tel：0532-85906585
教育背景：
2005年9月-2009年6月，中国海洋大学，生物技术，本科；
2005年9月-2009年6月，中国海洋大学，计算机科学与技术，本科；
2011年9月-2017年8月，美国奥本大学，水生生物基因组学，博士；
科研工作经历：
2017年9月-2020年12月，美国芝加哥大学Ben May癌症研究中心从事博士后研究。
2021年7月-，中国海洋大学海洋生命学院，海洋生物多样性与进化研究所，副教授。
研究方向和研究成果：
主要研究方向为基于多组学数据解析水生生物的适应性性状、性别决定机制以及基因组复杂变异的产生和维系机制。主要论文以第一或共同第一作者发表在Nat Commun, BMC Biol, Mol Ecol Resour, Cell Discov等杂志上。
Assoc. Prof. Lisui Bao
Education:
2005.09-2009.06 B.A. in Biotechnology, Ocean University of China, China.
2005.09-2009.06 B.A. in Computer Science and Technology, Ocean University of China, China.
2011.09-2017.08 Ph.D. in Aquaculture Genomics, Auburn University, USA.
Academic appointments：
2017.9-2020.12 Postdoctoral scholar in The Ben May Department for Cancer Research of The University of Chicago, USA.
Research focus:
We develop new computational methods to integrate the large scale genomic, transcriptomic, and epigenetic data to understand the mechanisms of evolutionary adaptation, sex determination and chromosomal rearrangement.
Publications:
* 代表共同第一作者
# 代表共同通讯作者
1.H Wang*, J Lv*, Q Zeng, Y Liu, Q Xing, S Wang, J Hua, L Bao#: Genetic differentiation and selection signatures in two bay scallop (Argopecten irradians) breeds revealed by whole-genome resequencing analysis. Aquaculture 2021, 543: 736944.
2.L Bao, C Tian, S Liu, Y Zhang, A Elaswad, Z Yuan, K Khalil, F Sun, Y Yang, T Zhou, N Li, S Tan, Q Zeng, Y Liu, Y Li, Y Li, D Gao, R Dunham, K Davis, G Waldbieser, Z Liu: The Y chromosome sequence of the channel catfish suggests novel sex determination mechanisms in teleost fish. BMC Biol 2019, 17(1):6.
3.Z Liu*, S Liu*, J Yao*, L Bao*, J Zhang*, Y Li*, C Jiang, L Sun, R Wang, Y Zhang, T Zhou, Q Zeng, Q Fu, S Gao, N Li, S Koren, Y Jiang, A Zimin, P Xu, A Phillippy, X Geng, L Song, F Sun, C Li, X Wang, A Chen, Y Jin, Z Yuan, Y Yang, S Tan, E Peatman, J Lu, Z Qin, R Dunham, Z Li, T Sonstegard, J Feng, R Danzmann, S Schroeder, B Scheffler, M Duke, L Ballard, H Kucuktas, L Kaltenboeck, H Liu, J Armbruster, Y Xie, M Kirby, Y Tian, M Flanagan, W Mu, G Waldbieser: The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts. Nat Commun 2016, 7.
4.Y He*, Y Chang*, L Bao*, M Yu*, R Li*, J Niu, G Fan, W Song, I Seim, Y Qin, X Li, J Liu, X Kong, M Peng, M Sun, M Wang, J Qu, X Wang, X Liu, X Wu, X Zhao, X Wang, Y Zhang, J Guo, Y Liu, K Liu, Y Wang, H Zhang, L Liu, M Wang, H Yu, X Wang, J Cheng, Z Wang, X Xu, J Wang, H Yang, SM Lee, X Liu, Q Zhang, J Qi: A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth. Mol Ecol Resour 2019, 19(5):1309-1321.
5.Y Li*, R Wang*, X Xun*, J Wang*, L Bao*, R Thimmappa*, J Ding*, J Jiang*, L Zhang, T Li, J Lv, C Mu, X Hu, L Zhang, J Liu, Y Li, L Yao, W Jiao, Y Wang, S Lian, Z Zhao, Y Zhan, X Huang, H Liao, J Wang, H Sun, X Mi, Y Xia, Q Xing, W Lu, A Osbourn, Z Zhou, Y Chang, Z Bao, S Wang: Sea cucumber genome provides insights into saponin biosynthesis and aestivation regulation. Cell Discov 2018, 4:29.
6.R Wang*, L Sun*, L Bao*, J Zhang, Y Jiang, J Yao, L Song, J Feng, S Liu, Z Liu: Bulk segregant RNA-seq reveals expression and positional candidate genes and allele-specific expression for disease resistance against enteric septicemia of catfish. BMC Genomics 2013, 14:929.
7.L Bao, Z Liu (2017). Analysis of repetitive elements in the genome. Bioinformatics in Aquaculture: Principles and Methods, 86-94.
